Search results for "Bayesian [statistical analysis]"

Robust Conditional Independence maps of single-voxel Magnetic Resonance Spectra to elucidate associations between brain tumours and metabolites.

2020

The aim of the paper is two-fold. First, we show that structure finding with the PC algorithm can be inherently unstable and requires further operational constraints in order to consistently obtain models that are faithful to the data. We propose a methodology to stabilise the structure finding process, minimising both false positive and false negative error rates. This is demonstrated with synthetic data. Second, to apply the proposed structure finding methodology to a data set comprising single-voxel Magnetic Resonance Spectra of normal brain and three classes of brain tumours, to elucidate the associations between brain tumour types and a range of observed metabolites that are known to b…

Towards an Assembly Support System with Dynamic Bayesian Network

2022

Due to the new technological advancements and the adoption of Industry 4.0 concepts, the manufacturing industry is now, more than ever, in a continuous transformation. This work analyzes the possibility of using dynamic Bayesian networks to predict the next assembly steps within an assembly assistance training system. The goal is to develop a support system to assist the human workers in their manufacturing activities. The evaluations were performed on a dataset collected from an experiment involving students. The experimental results show that dynamic Bayesian networks are appropriate for such a purpose, since their prediction accuracy was among the highest on new patterns. Our dynamic Bay…

Non-communicable diseases, socio-economic status, lifestyle and well-being in Italy: An additive Bayesian network model

2018

The aim of the paper is to investigate the statistical association, on a sample of Italian subjects, extracted by Survey of Health, Ageing and Retirement in Europe (SHARE) dataset, between chronic diseases (occurrence or number of chronic diseases) and socio-economic and behavioural determinants (lifestyle indicators, QoL indicators, cognitive functioning variables). To this aim, additive Bayesian network (ABN) analysis was used. The resulting ABN model shows that better educated individuals have better health outcomes, age is direct and gender is an indirect determinant of the number of chronic diseases. Furthermore, self-perceived health is associated with lower number of chronic diseases…

Model averaging estimation of generalized linear models with imputed covariates

2015

a b s t r a c t We address the problem of estimating generalized linear models when some covariate values are missing but imputations are available to fill-in the missing values. This situation generates a bias-precision trade- off in the estimation of the model parameters. Extending the generalized missing-indicator method proposed by Dardanoni et al. (2011) for linear regression, we handle this trade-off as a problem of model uncertainty using Bayesian averaging of classical maximum likelihood estimators (BAML). We also propose a block model averaging strategy that incorporates information on the missing-data patterns and is computationally simple. An empirical application illustrates our…

Modern taurine cattle descended from small number of near-eastern founders.

2012

Archaeozoological and genetic data indicate that taurine cattle were first domesticated from local wild ox (aurochs) in the Near East some 10,500 years ago. However, while modern mitochondrial DNA (mtDNA) variation indicates early Holocene founding event(s), a lack of ancient DNA data from the region of origin, variation in mutation rate estimates, and limited application of appropriate inference methodologies have resulted in uncertainty on the number of animals first domesticated. A large number would be expected if cattle domestication was a technologically straightforward and unexacting region-wide phenomenon, while a smaller number would be consistent with a more complex and challengin…

A Phylogenetic Analysis of Human Syntenies Revealed by Chromosome Painting in Euarchontoglires Orders

2010

To search for cytogenetic signatures that can help to clarify evolutionary affinities among the five orders within the Euarchontoglires clade, we focused on associations of conserved syntenic blocks that have been accumulated in the karyotypes of Primates (Strepsirhini and Haplorhini), five families of Rodentia, Scandentia (Tupaia belangeri), Dermoptera (Galeopterus variegatus) and Lagomorpha (Oryctolagus cuniculus). We examined available chromosome painting data to identify conserved chromosomes and chromosomal segments, and syntenic associations likely to have characterized the ancestral eutherian karyotype. The data set includes 161 characters that have been subjected to a concatenated a…

Selective phenotyping, entropy reduction, and the mastermind game.

2011

Abstract Background With the advance of genome sequencing technologies, phenotyping, rather than genotyping, is becoming the most expensive task when mapping genetic traits. The need for efficient selective phenotyping strategies, i.e. methods to select a subset of genotyped individuals for phenotyping, therefore increases. Current methods have focused either on improving the detection of causative genetic variants or their precise genomic location separately. Results Here we recognize selective phenotyping as a Bayesian model discrimination problem and introduce SPARE (Selective Phenotyping Approach by Reduction of Entropy). Unlike previous methods, SPARE can integrate the information of p…

2021

The domestication and spreading of grapevine as well as the gene flow history had been described in many studies. We used a high-quality 7k SNP dataset of 1,038 Eurasian grape varieties with unique profiles to assess the population genetic diversity, structure, and relatedness, and to infer the most likely migration events. Comparisons of putative scenarios of gene flow throughout Europe from Caucasus helped to fit the more reliable migration routes around the Mediterranean Basin. Approximate Bayesian computation (ABC) approach made possible to provide a response to several questions so far remaining unsolved. Firstly, the assessment of genetic diversity and population structure within a we…

Benefits of a dance group intervention on institutionalized elder people: A Bayesian network approach

2018

[EN] The present study aims to explore the effects of an adapted classical dance intervention on the psychological and functional status of institutionalized elder people using a Bayesian network. All participants were assessed at baseline and after the 9 weeks period of the intervention. Measures included balance and gait, psychological well-being, depression, and emotional distress. According to the Bayesian network obtained, the dance intervention increased the likelihood of presenting better psychological well-being, balance, and gait. Besides, it also decreased the probabilities of presenting emotional distress and depression. These findings demonstrate that dancing has functional and …

Grip Force Adjustments Reflect Prediction of Dynamic Consequences in Varying Gravitoinertial Fields

2018

International audience; Humans have a remarkable ability to adjust the way they manipulate tools through a genuine regulation of grip force according to the task. However, rapid changes in the dynamical context may challenge this skill, as shown in many experimental approaches. Most experiments adopt perturbation paradigms that affect only one sensory modality. We hypothesize that very fast adaptation can occur if coherent information from multiple sensory modalities is provided to the central nervous system. Here, we test whether participants can switch between different and never experienced dynamical environments induced by centrifugation of the body. Seven participants lifted an object …